PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100226270011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 228aa    MW: 26496.3 Da    PI: 7.0633
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100226270011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-1070115855
                                   HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                                    Er+RR+++ + f+ L++++P+ +   ++ K+ K  i   +v++Ik+Lq
  Ote100226270011|100226270011  70 KERKRREQMTDNFFLLQSMVPSlR---KAYKPCKERIISDTVNHIKYLQ 115
                                   6*********************66...*********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.8862114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.72E-1268129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.8E-568120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.6E-870115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.57E-671119No hitNo description
Gene3DG3DSA:4.10.280.101.9E-1171133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MSERGKRVVE NPESEEEELK RLFLGIMEGY NDALIPPLSY FSPSPEIPNH EQHSPNSTKR  60
QKTDSESSYK ERKRREQMTD NFFLLQSMVP SLRKAYKPCK ERIISDTVNH IKYLQEEAER  120
LEGLVKFQRK LQNVERPIFS RCSTHSPVNV MISNSITFFA VQLPFKRGLV LDILRVLEKH  180
QAEVLDAKVN VNDEKVLTFT ATLRLEVEGN NTAELMRQEI LTSLDLPY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090844.11e-71PREDICTED: transcription factor bHLH25-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132481415